Voluntary ban on cephalosporin use in Danish pig production has effectively reduced extended-spectrum cephalosporinase-producing Escherichia coli in slaughter pigs. Agerso, Yvonne; Aarestrup, Frank M. Journal Of Antimicrobial Chemotherapy

A brief multi-disciplinary review on antimicrobial resistance in medicine and its linkage to the global environmental microbiota.

Cantas, L.; Shah, Syed Q. A.; Cavaco, L. M.; Manaia, C. M.; Walsh, F.; Popowska, M.; Garelick, H.; Buergmann, H.; Sorum, H. Frontiers In Microbiology

Human Deaths and Third-Generation Cephalosporin use in Poultry, Europe.

Collignon, Peter; Aarestrup, Frank M.; Irwin, Rebecca; McEwen, Scott. Emerging Infectious Diseases

PathogenFinder - Distinguishing Friend from Foe Using Bacterial Whole Genome Sequence Data.

Cosentino, Salvatore; Larsen, Mette Voldby; Aarestrup, Frank Moller; Lund, Ole. Plos One

Occurrence of Listeria spp. in Retail Meat and Dairy Products in the Area of Addis Ababa, Ethiopia. 

Derra, Firehiwot Abera; Karlsmose, Susanne; Monga, Dharam P.; Mache, Abebe; Svendsen, Christina Aaby; Felix, Benjamin; Granier, Sophie A.; Geyid, Abera; Taye, Girum; Hendriksen, Rene S. Foodborne Pathogens And Disease

Characterization of IncN plasmids carrying bla(CTX-M-1) and qnr genes in Escherichia coli and Salmonella from animals, the environment and humans.

Dolejska, Monika; Villa, Laura; Hasman, Henrik; Hansen, Lars; Carattoli, Alessandra. Journal Of Antimicrobial Chemotherapy

Extremely Drug-Resistant Salmonella enterica Serovar Senftenberg Infections in Patients in Zambia.

Hendriksen, Rene S.; Joensen, Katrine Grimstrup; Lukwesa-Musyani, Chileshe; Kalondaa, Annie; Leekitcharoenphon, Pimlapas; Nakazwe, Ruth; Aarestrup, Frank M.; Hasman, Henrik; Mwansa, James C. L. Journal Of Clinical Microbiology

Dissemination of Clonal Salmonella enterica Serovar Typhimurium Isolates Causing Salmonellosis in Mauritius.

Issack, Mohammad I.; Garcia-Migura, Lourdes; Ramsamy, Veemala D.; Svendsen, Christina A.; Pornruangwong, Srirat; Pulsrikarn, Chaiwat; Hendriksen, Rene S. Foodborne Pathogens And Disease

External quality assurance system (EQAS) for identification of mastitis pathogens in Denmark from 2006 to 2011.

Karlsmose, S.; Kunstmann, L.; Rundsten, C. F.; Krogh, K.; Larsen, H. K. D.; Jensen, A. B.; Aarestrup, F. M.; Hendriksen, R. S. Preventive Veterinary Medicine

Genomics of an emerging clone of Salmonella serovar Typhimurium ST313 from Nigeria and the Democratic Republic of Congo.

Leekitcharoenphon, Pimlapas; Friis, Carsten; Zankari, Ea; Svendsen, Christina A.; Price, Lance B.; Rahmani, Maral; Herrero-Fresno, Ana; Fashae, Kayode; Vandenberg, Olivier; Aarestrup, Frank M.; Hendriksen, Rene S. 

Journal Of Infection In Developing Countries Public Health Risks of Enterobacterial Isolates Producing Extended-Spectrum beta-Lactamases or AmpC beta-Lactamases in Food and Food-Producing Animals: An EU Perspective of Epidemiology, Analytical Methods, Risk Factors, and Control Options.

Liebana, Ernesto; Carattoli, Alessandra; Coque, Teresa M.; Hasman, Henrik; Magiorakos, Anna-Pelagia; Mevius, Dik; Peixe, Luisa; Poirel, Laurent; Schuepbach-Regula, Gertraud; Torneke, Karolina; Torren-Edo, Jordi; Torres, Carmen; Threlfall, John. Clinical Infectious Diseases

Molecular clonality and antimicrobial resistance in Salmonella enterica serovars Enteritidis and Infantis from broilers in three Northern regions of Iran. 

Rahmani, Maral; Peighambari, Seyed Mostafa; Svendsen, Christina Aaby; Cavaco, Lina M.; Agerso, Yvonne; Hendriksen, Rene S. Bmc Veterinary Research

Antimicrobial resistance and molecular epidemiology of streptococci from bovine mastitis.

Rato, Marcia G.; Bexiga, Ricardo; Florindo, Carlos; Cavaco, Lina M.; Vilela, Cristina L.; Santos-Sanches, Ilda. Veterinary Microbiology

The first attempt of an active integrated laboratory-based Salmonella surveillance programme in the north-eastern region of Nigeria.

Raufu, I.; Bortolaia, V.; Svendsen, C. A.; Ameh, J. A.; Ambali, A. G.; Aarestrup, F. M.; Hendriksen, R. S. Journal Of Applied Microbiology

Livestock Origin for a Human Pandemic Clone of Community-Associated Methicillin-Resistant Staphylococcus aureus.

Spoor, Laura E.; McAdam, Paul R.; Weinert, Lucy A.; Rambaut, Andrew; Hasman, Henrik; Aarestrup, Frank M.; Kearns, Angela M.; Larsen, Anders R.; Skov, Robert L.; Fitzgerald, J. Ross. Mbio

Occurrence of Salmonella in retail beef and related meat products in Zaria, Nigeria. Tafida, S. Y.; Kabir, J.; Kwaga, J. K. P.; Bello, M.; Umoh, V. J.; Yakubu, S. E.; Nok, A. J.; Hendriksen, r. Food Control

Detection of a Shiga toxin- and extended-spectrum-beta-lactamase-producing Escherichia coli O157:H7 human clinical isolate.

Torpdahl, Mia; Nielsen, Eva M.; Scheutz, Flemming; Olesen, Bente; Hansen, Dennis S.; Hasman, Henrik. Journal Of Antimicrobial Chemotherapy

Using next generation sequencing to tackle non-typhoidal Salmonella infections. Wain, John; Keddy, Karen H.; Hendriksen, Rene S.; Rubino, Salvatore. Journal Of Infection In Developing Countries

Genotyping using whole-genome sequencing is a realistic alternative to surveillance based on phenotypic antimicrobial susceptibility testing.

Zankari, Ea; Hasman, Henrik; Kaas, Rolf Sommer; Seyfarth, Anne Mette; Agerso, Yvonne; Lund, Ole; Larsen, Mette Voldby; Aarestrup, Frank M. Journal Of Antimicrobial Chemotherapy

Comparison of air samples, nasal swabs, ear-skin swabs and environmental dust samples for detection of methicillin-resistant Staphylococcus aureus (MRSA) in pig herds.

Agersø Y, Vigre H, Cavaco LM, Josefsen MH. Epidemiol Infect.

The diversity of inducible and constitutively expressed erm(C) genes and association to different replicon types in staphylococci plasmids.

de Vries LE, Christensen H, Agersø Y. Mob Genet Elements.

Spatio-temporal analysis of Salmonella surveillance data in Thailand.

Domingues AR, Vieira AR, Hendriksen RS, Pulsrikarn C, Aarestrup FM. Epidemiol Infect.

Extended-spectrum β-lactamase (ESBL) in Danish clinical isolates of Escherichia coli and Klebsiella pneumoniae: prevalence, β-lactamase distribution, phylogroups, and co-resistance.

Hansen DS, Schumacher H, Hansen F, Stegger M, Hertz FB, Schønning K, Justesen US, Frimodt-Møller N; DANRES Study Group. Scand J Infect Dis

The global establishment of a highly-fluoroquinolone resistant Salmonella enterica serotype Kentucky ST198 strain.

Le Hello S, Bekhit A, Granier SA, Barua H, Beutlich J, Zając M, Münch S, Sintchenko V, Bouchrif B, Fashae K, Pinsard JL, Sontag L, Fabre L, Garnier M, Guibert V, Howard P, Hendriksen RS, Christensen JP, Biswas PK, Cloeckaert A, Rabsch W, Wasyl D, Doublet B, Weill FX. Front Microbiol

SCCmec Type IX Element in Methicillin Resistant Staphylococcusaureus spa Type t337 (CC9) Isolated from Pigs and Pork in Thailand.

Vestergaard M, Cavaco LM, Sirichote P, Unahalekhaka A, Dangsakul W, Svendsen CA, Aarestrup FM, Hendriksen RS. Front Microbiol.

Integrating genome-based informatics to modernize global disease monitoring, information sharing, and response.

Aarestrup FM, Brown EW, Detter C, Gerner-Smidt P, Gilmour MW, Harmsen D, Hendriksen RS, Hewson R, Heymann DL, Johansson K, Ijaz K, Keim PS, Koopmans M, Kroneman A, Lo Fo Wong D, Lund O, Palm D, Sawanpanyalert P, Sobel J, Schlundt J. Emerg Infect Dis​


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