Training Course (Enhancing WGS capacity for AMR surveillance in the EURL-AR network) - Kgs. Lyngby - September/2019

FYI: Presentations will be uploaded below as soon as they

become available to the training course organizers.

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Training Course Introduction

Valeria Bortolaia, EURL-AR

​​​(PDF document, 0.5 MB)

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As you sow you so shall you reap - sample to sequence process

By Saria Otani, DTU Food

​​​(PDF document, 3.5 MB)

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Sequencer output: do's and dont's

By Rolf Sommer Kaas, DTU Food

​​​(PDF document, 6 MB)

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Data sharing in the NARMS perspective

By Heather Tate, FDA US

​(PDF document, XX MB)

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Present and future of AMR surveillance

By Rene S. Hendriksen, EURL-AR

​​(PDF document, 17.5 MB)

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EFSA strategy on WGS for Food Safety

By Beatriz Guerra Román, EFSA

​(PDF document, XX MB)

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MinION sequencing: its role in AMR and bacterial typing​ 

By Henrik Hasman, SSI, Denmark

​(PDF document, 2 MB)

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True Whole Genome Sequencing Using Nanopore Technology

By Søren Overballe-Petersen, SSI, Denmark

​(PDF document, 2 MB)

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One Day in Denmark to test WGS-based AST

By Ana Rita Rebelo, DTU Food

(PDF document, 1 MB)

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Exercise 01

​​(PDF document, 1 MB)

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Exercise 02

​​(PDF document, 1 MB)

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Exercise 03

​​(PDF document, 7.5 MB)

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Exercise 01 and 02 - sum up

​​(PDF document, 4 MB)

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EURL-AR TC 2019 Quiz

​​(PDF document, 0.5 MB)

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Information​

Technical University of Denmark, National Food Institute

CVR: 30060946

AdDress

Denmark

DK-2800 Lyngby

Kemitorvet, Building 204​

Contact us

Tlf.: +45 3588 6601

E-mail: suska@food.dtu.dk